Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor nusa | APR48_11715 | Not Available | Negative | 2497656 - 2499140 | 54950.5 |
| ribosome maturation protein rimp | APR48_11720 | Not Available | Negative | 2499157 - 2499801 | 23339.7 |
| mfs transporter | APR48_11725 | Not Available | Negative | 2500073 - 2501293 | 41715.6 |
| microcin abc transporter atp-binding protein | APR48_11730 | Not Available | Negative | 2501334 - 2502980 | 58978.7 |
| peptide abc transporter permease | APR48_11735 | Not Available | Negative | 2502977 - 2504035 | 39083.0 |
| microcin abc transporter permease | APR48_11740 | Not Available | Negative | 2504040 - 2505074 | 38439.8 |
| peptide abc transporter substrate-binding protein | APR48_11745 | Not Available | Negative | 2505116 - 2506915 | 66675.3 |
| enoyl-acp reductase | APR48_11750 | Not Available | Positive | 2506954 - 2507736 | 27494.8 |
| atp-dependent dna ligase | APR48_11755 | Not Available | Positive | 2507878 - 2508717 | 30700.2 |
| lysine decarboxylase | APR48_11760 | Not Available | Negative | 2508756 - 2511053 | 86308.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
