Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein | APR48_11665 | Not Available | Positive | 2486386 - 2486862 | 18091.9 |
| hypothetical protein | APR48_11670 | Not Available | Positive | 2486961 - 2487344 | 13361.8 |
| rna polymerase subunit sigma-24 | APR48_11675 | Not Available | Positive | 2487366 - 2487917 | 19929.2 |
| anti-sigma factor | APR48_11680 | Not Available | Positive | 2487922 - 2488740 | 29634.1 |
| atp-binding protein | APR48_11685 | Not Available | Positive | 2488820 - 2489215 | 13647.2 |
| hypothetical protein | APR48_11690 | Not Available | Positive | 2489330 - 2491261 | 68847.7 |
| gtp-binding protein typa | APR48_11695 | Not Available | Negative | 2491304 - 2493136 | 67263.9 |
| trna pseudouridine synthase b | APR48_11700 | Not Available | Negative | 2493133 - 2494089 | 34025.0 |
| ribosome-binding factor a | APR48_11705 | Not Available | Negative | 2494092 - 2494463 | 13689.5 |
| translation initiation factor if-2 | APR48_11710 | Not Available | Negative | 2494608 - 2497631 | 107181.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
