Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prevent-host-death protein | APR48_11615 | Not Available | Negative | 2477810 - 2478058 | 8911.83 |
| inosine-5'-monophosphate dehydrogenase | APR48_11620 | Not Available | Negative | 2478150 - 2479619 | 51730.4 |
| hypothetical protein | APR48_11625 | Not Available | Positive | 2479829 - 2480338 | 18288.8 |
| protein rnfh | APR48_11630 | Not Available | Negative | 2480354 - 2480689 | 12361.6 |
| cyclase | APR48_11635 | Not Available | Negative | 2480697 - 2481143 | 16334.5 |
| carboxymethylenebutenolidase | APR48_11640 | Not Available | Negative | 2481221 - 2482459 | 45486.2 |
| hypothetical protein | APR48_11645 | Not Available | Negative | 2482511 - 2483053 | 19156.2 |
| alanine-phosphoribitol ligase | APR48_11650 | Not Available | Negative | 2483056 - 2484330 | 46306.0 |
| short-chain dehydrogenase | APR48_11655 | Not Available | Negative | 2484382 - 2485170 | 27219.6 |
| hypothetical protein | APR48_11660 | Not Available | Positive | 2485302 - 2486300 | 36549.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
