Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine acyltransferase | APR48_11510 | Not Available | Positive | 2457248 - 2458036 | 27900.7 |
| lipid-a-disaccharide synthase | APR48_11515 | Not Available | Positive | 2458077 - 2459195 | 40850.9 |
| ribonuclease hii | APR48_11520 | Not Available | Positive | 2459167 - 2459883 | 25596.3 |
| rrna methyltransferase | APR48_11525 | Not Available | Positive | 2459888 - 2460673 | 27227.9 |
| carbamoyl phosphate synthase small subunit | APR48_11530 | Not Available | Positive | 2460906 - 2462099 | 42658.2 |
| carbamoyl phosphate synthase large subunit | APR48_11535 | Not Available | Positive | 2462092 - 2465340 | 117817.0 |
| 3-deoxy-d-manno-oct-2-ulosonic acid (kdo) hydroxylase | APR48_11540 | Not Available | Positive | 2465349 - 2466218 | 32527.9 |
| transcription elongation factor grea | APR48_11545 | Not Available | Positive | 2466283 - 2466762 | 17252.4 |
| hypothetical protein | APR48_11550 | Not Available | Positive | 2466774 - 2467193 | 15322.4 |
| glycosyltransferase | APR48_11555 | Not Available | Negative | 2467208 - 2467927 | 27933.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
