Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s12 methylthiotransferase rimo | APR48_11410 | Not Available | Positive | 2436582 - 2437988 | 50883.4 |
| Trna-leu | Not Available | Not Available | Positive | 2438076 - 2438160 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2438382 - 2438466 | Not Available |
| ribonuclease r | APR48_11425 | Not Available | Positive | 2438521 - 2440812 | 84119.3 |
| 3-oxoacyl-acp reductase | APR48_11430 | Not Available | Positive | 2440881 - 2441642 | 26460.8 |
| carbohydrate kinase | APR48_11435 | Not Available | Negative | 2441650 - 2443116 | 49376.1 |
| hypothetical protein | APR48_11440 | Not Available | Positive | 2443149 - 2443580 | 15625.5 |
| amino acid dehydrogenase | APR48_11445 | Not Available | Negative | 2443584 - 2444837 | 44564.7 |
| 30s ribosomal protein s2 | APR48_11450 | Not Available | Positive | 2445283 - 2446035 | 27516.2 |
| elongation factor ts | APR48_11455 | Not Available | Positive | 2446115 - 2447038 | 32519.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
