Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | APR48_11360 | Not Available | Negative | 2427351 - 2428763 | 51832.6 |
| two-component system response regulator | APR48_11365 | Not Available | Negative | 2428837 - 2429568 | 27190.9 |
| hypothetical protein | APR48_11370 | Not Available | Positive | 2429727 - 2430089 | 13090.8 |
| hypothetical protein | APR48_11375 | Not Available | Positive | 2430255 - 2430902 | 22741.0 |
| 3-hydroxybutyrate dehydrogenase | APR48_11380 | Not Available | Negative | 2430951 - 2431721 | 26979.3 |
| alpha/beta hydrolase | APR48_11385 | Not Available | Positive | 2431748 - 2432737 | 35311.0 |
| gtp pyrophosphokinase | APR48_11390 | Not Available | Positive | 2432775 - 2434979 | 80505.5 |
| Trna-val | Not Available | Not Available | Positive | 2435047 - 2435123 | Not Available |
| hypothetical protein | APR48_11400 | Not Available | Positive | 2435553 - 2435900 | 12761.1 |
| polyhydroxyalkanoate biosynthesis repressor phar | APR48_11405 | Not Available | Positive | 2435982 - 2436542 | 21162.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
