Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | APR48_11260 | Not Available | Positive | 2408378 - 2408938 | 19977.7 |
| endonuclease iii | APR48_11265 | Not Available | Negative | 2408946 - 2409590 | 23677.8 |
| aspartate aminotransferase | APR48_11270 | Not Available | Positive | 2409698 - 2410885 | 42377.3 |
| hypothetical protein | APR48_11275 | Not Available | Negative | 2410895 - 2411122 | 7936.86 |
| hypothetical protein | APR48_11280 | Not Available | Positive | 2411195 - 2411530 | 12401.4 |
| lactate dehydrogenase | APR48_11285 | Not Available | Negative | 2411531 - 2412610 | 37842.6 |
| abc transporter substrate-binding protein | APR48_11290 | Not Available | Negative | 2412625 - 2413599 | 34445.5 |
| enoyl-coa hydratase | APR48_11295 | Not Available | Positive | 2413742 - 2414524 | 27689.0 |
| acyl-coa dehydrogenase | APR48_11300 | Not Available | Positive | 2414539 - 2415633 | 38146.7 |
| acyl-coa dehydrogenase | APR48_11305 | Not Available | Positive | 2415635 - 2416828 | 42622.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
