Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_00375 | Not Available | Positive | 80550 - 81419 | 30931.9 |
| omega amino acid--pyruvate aminotransferase | APR48_00380 | Not Available | Negative | 81420 - 82772 | 48269.7 |
| lysr family transcriptional regulator | APR48_00385 | Not Available | Positive | 82870 - 83820 | 34927.3 |
| gntr family transcriptional regulator | APR48_00390 | Not Available | Negative | 83830 - 84594 | 29123.0 |
| branched-chain amino acid abc transporter substrate-binding protein | APR48_00395 | Not Available | Positive | 84837 - 86042 | 43060.0 |
| abc transporter permease | APR48_00400 | Not Available | Positive | 86128 - 86988 | 30359.5 |
| abc transporter permease | APR48_00405 | Not Available | Positive | 86994 - 87953 | 33922.5 |
| abc transporter atp-binding protein | APR48_00410 | Not Available | Positive | 87950 - 88717 | 27670.7 |
| abc transporter atp-binding protein | APR48_00415 | Not Available | Positive | 88714 - 89427 | 25754.4 |
| allantoate amidohydrolase | APR48_00420 | Not Available | Positive | 89455 - 90708 | 44143.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
