Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | APR48_11210 | Not Available | Positive | 2395675 - 2396559 | 30731.6 |
| rnd transporter mfp subunit | APR48_11215 | Not Available | Positive | 2396735 - 2397991 | 44042.4 |
| transporter | APR48_11220 | Not Available | Positive | 2398185 - 2401469 | 116993.0 |
| rnd transporter | APR48_11225 | Not Available | Positive | 2401504 - 2402985 | 51641.7 |
| marr family transcriptional regulator | APR48_11230 | Not Available | Negative | 2402990 - 2403547 | 20355.6 |
| abc transporter substrate-binding protein | APR48_11235 | Not Available | Positive | 2403674 - 2404651 | 34430.0 |
| hypothetical protein | APR48_11240 | Not Available | Negative | 2404662 - 2404886 | 8199.64 |
| cobalamin biosynthesis protein cobq | APR48_11245 | Not Available | Positive | 2405111 - 2406532 | 50350.4 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | APR48_11250 | Not Available | Positive | 2406529 - 2407575 | 35683.4 |
| cobalamin synthase | APR48_11255 | Not Available | Positive | 2407581 - 2408375 | 26662.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
