Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hxlr family transcriptional regulator | APR48_11005 | Not Available | Positive | 2355882 - 2356241 | 13369.3 |
| hypothetical protein | APR48_11010 | Not Available | Positive | 2356252 - 2357451 | 42632.3 |
| osmotically inducible protein osmc | APR48_11015 | Not Available | Negative | 2357463 - 2357864 | 14664.4 |
| gcn5 family acetyltransferase | APR48_11020 | Not Available | Negative | 2357893 - 2358375 | 17951.3 |
| asnc family transcriptional regulator | APR48_11025 | Not Available | Negative | 2358400 - 2358867 | 17522.5 |
| amino acid dehydrogenase | APR48_11030 | Not Available | Positive | 2358997 - 2360298 | 47133.6 |
| rieske (2fe-2s) protein | APR48_11035 | Not Available | Negative | 2360435 - 2361514 | 40884.5 |
| cmp deaminase | APR48_11040 | Not Available | Positive | 2361938 - 2362465 | 18924.1 |
| urease accessory protein ured | APR48_11045 | Not Available | Positive | 2362487 - 2363317 | 30144.2 |
| diguanylate cyclase | APR48_11050 | Not Available | Positive | 2363442 - 2364968 | 54295.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
