Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylate carboligase | APR48_10905 | Not Available | Positive | 2334263 - 2336056 | 65025.5 |
| hydroxypyruvate isomerase | APR48_10910 | Not Available | Positive | 2336220 - 2337005 | 28762.3 |
| 2-hydroxy-3-oxopropionate reductase | APR48_10915 | Not Available | Positive | 2337041 - 2337949 | 31162.9 |
| hydroxylase | APR48_10920 | Not Available | Negative | 2338088 - 2339425 | 49989.7 |
| malic enzyme | APR48_10925 | Not Available | Positive | 2339682 - 2341982 | 82145.6 |
| taurine abc transporter permease | APR48_10930 | Not Available | Positive | 2342193 - 2343227 | 36478.1 |
| nitrate abc transporter atp-binding protein | APR48_10935 | Not Available | Positive | 2343227 - 2344078 | 31850.7 |
| abc transporter permease | APR48_10940 | Not Available | Positive | 2344088 - 2344858 | 28072.1 |
| sam-dependent methyltransferase | APR48_10945 | Not Available | Negative | 2344862 - 2345725 | 30354.1 |
| merr family transcriptional regulator | APR48_10950 | Not Available | Positive | 2345803 - 2346273 | 16954.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
