Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_10855 | Not Available | Negative | 2321767 - 2322165 | 14958.1 |
| hypothetical protein | APR48_10860 | Not Available | Positive | 2322312 - 2322923 | 21798.7 |
| hypothetical protein | APR48_10865 | Not Available | Positive | 2322942 - 2324744 | 64893.4 |
| hypothetical protein | APR48_10870 | Not Available | Positive | 2325100 - 2327628 | 89590.1 |
| c4-dicarboxylate abc transporter | APR48_10875 | Not Available | Positive | 2327810 - 2329150 | 46890.3 |
| gntr family transcriptional regulator | APR48_10880 | Not Available | Positive | 2329172 - 2329879 | 25712.8 |
| hypothetical protein | APR48_10885 | Not Available | Positive | 2329981 - 2331096 | 40055.0 |
| hypothetical protein | APR48_10890 | Not Available | Positive | 2331278 - 2331697 | 14220.8 |
| carotenoid oxygenase | APR48_10895 | Not Available | Positive | 2331708 - 2333213 | 54687.6 |
| lysr family transcriptional regulator | APR48_10900 | Not Available | Negative | 2333230 - 2334132 | 33010.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
