Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | APR48_10805 | Not Available | Negative | 2312229 - 2313380 | 41735.3 |
| iclr family transcriptional regulator | APR48_10810 | Not Available | Negative | 2313444 - 2314208 | 27466.2 |
| abc transporter substrate-binding protein | APR48_10815 | Not Available | Positive | 2314405 - 2315391 | 34895.6 |
| hypothetical protein | APR48_10820 | Not Available | Positive | 2315430 - 2315864 | 14973.1 |
| thiolase | APR48_10825 | Not Available | Positive | 2315861 - 2317024 | 40154.0 |
| crotonase | APR48_10830 | Not Available | Positive | 2317057 - 2317863 | 29120.3 |
| short-chain dehydrogenase | APR48_10835 | Not Available | Positive | 2317905 - 2318720 | 28012.1 |
| hypothetical protein | APR48_10840 | Not Available | Positive | 2318854 - 2319996 | 41393.0 |
| dna-binding protein | APR48_10845 | Not Available | Positive | 2320115 - 2321041 | 33601.7 |
| hypothetical protein | APR48_10850 | Not Available | Positive | 2321095 - 2321754 | 23452.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
