Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-aminoethylphosphonate--pyruvate aminotransferase | APR48_00325 | Not Available | Negative | 69284 - 70414 | 40387.6 |
| phosphonate abc transporter permease | APR48_00330 | Not Available | Negative | 70454 - 72187 | 62649.4 |
| amino acid abc transporter substrate-binding protein | APR48_00335 | Not Available | Negative | 72184 - 73323 | 41449.1 |
| phosphonate abc transporter substrate-binding protein | APR48_00340 | Not Available | Negative | 73410 - 74450 | 37976.5 |
| phosphonate utilization associated transcriptional regulator | APR48_00345 | Not Available | Positive | 74609 - 75331 | 26734.0 |
| phosphonoacetate hydrolase | APR48_00350 | Not Available | Positive | 75333 - 76559 | 44033.9 |
| phosphonoacetaldehyde dehydrogenase | APR48_00355 | Not Available | Positive | 76578 - 78026 | 52813.6 |
| phosphohydrolase | APR48_00360 | Not Available | Positive | 78029 - 78592 | 20359.1 |
| hypothetical protein | APR48_00365 | Not Available | Positive | 78589 - 79038 | 16424.0 |
| fad-dependent oxidoreductase | APR48_00370 | Not Available | Positive | 79057 - 80445 | 50253.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
