Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-layer protein | APR48_10700 | Not Available | Positive | 2285499 - 2287037 | 55822.1 |
| nitrate reductase | APR48_10705 | Not Available | Positive | 2287289 - 2288782 | 53868.1 |
| asp/glu/hydantoin racemase | APR48_10710 | Not Available | Positive | 2288811 - 2289551 | 26158.9 |
| gntr family transcriptional regulator | APR48_10715 | Not Available | Positive | 2289598 - 2290365 | 28010.7 |
| xre family transcriptional regulator | APR48_10720 | Not Available | Positive | 2290377 - 2290919 | 19689.8 |
| nad-dependent epimerase | APR48_10725 | Not Available | Positive | 2291022 - 2292014 | 36479.1 |
| permease | APR48_10730 | Not Available | Positive | 2292187 - 2293674 | 51639.2 |
| abc transporter permease | APR48_10735 | Not Available | Negative | 2293743 - 2294531 | 28215.6 |
| hypothetical protein | APR48_10740 | Not Available | Negative | 2294534 - 2295346 | 29873.4 |
| myristoyl transferase | APR48_10745 | Not Available | Negative | 2295327 - 2296292 | 34252.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
