Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_10650 | Not Available | Negative | 2275968 - 2276402 | 14699.8 |
| tetr family transcriptional regulator | APR48_10655 | Not Available | Negative | 2276527 - 2277156 | 22910.4 |
| hypothetical protein | APR48_10660 | Not Available | Positive | 2277477 - 2277950 | 17861.4 |
| mfs transporter | APR48_10665 | Not Available | Positive | 2277974 - 2279410 | 49326.8 |
| hydrolase | APR48_10670 | Not Available | Positive | 2279751 - 2280773 | 35141.6 |
| cytochrome b | APR48_10675 | Not Available | Negative | 2280836 - 2281381 | 20077.6 |
| caspase | APR48_10680 | Not Available | Negative | 2281378 - 2282445 | 38477.4 |
| nad synthetase | APR48_10685 | Not Available | Negative | 2282813 - 2284237 | 49346.2 |
| nad(p) transhydrogenase | APR48_10690 | Not Available | Negative | 2284234 - 2284563 | 11408.5 |
| nadp transhydrogenase subunit alpha | APR48_10695 | Not Available | Negative | 2284588 - 2285498 | 31248.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
