Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_10445 | Not Available | Positive | 2231747 - 2232568 | 31256.1 |
| alkylhydroperoxidase | APR48_10450 | Not Available | Positive | 2232978 - 2233430 | 16501.8 |
| rna polymerase subunit sigma-24 | APR48_10455 | Not Available | Negative | 2233447 - 2234358 | 34598.6 |
| hypothetical protein | APR48_10460 | Not Available | Negative | 2235178 - 2235417 | 9098.9 |
| hypothetical protein | APR48_10465 | Not Available | Positive | 2235952 - 2236236 | 10361.7 |
| relaxase | APR48_10470 | Not Available | Positive | 2236238 - 2237344 | 41393.3 |
| hypothetical protein | APR48_10475 | Not Available | Negative | 2237447 - 2238193 | 28226.8 |
| hypothetical protein | APR48_10485 | Not Available | Negative | 2239982 - 2240188 | 7557.12 |
| glyoxalase | APR48_10490 | Not Available | Positive | 2240241 - 2240819 | 21961.8 |
| mbl fold metallo-hydrolase | APR48_10495 | Not Available | Positive | 2240842 - 2241804 | 34996.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
