Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_10395 | Not Available | Negative | 2217976 - 2219352 | 48826.8 |
| hypothetical protein | APR48_10400 | Not Available | Positive | 2219566 - 2219895 | 11964.1 |
| hypothetical protein | APR48_10405 | Not Available | Negative | 2219929 - 2220282 | 13057.6 |
| hypothetical protein | APR48_10410 | Not Available | Negative | 2220290 - 2220508 | 7269.42 |
| crp/fnr family transcriptional regulator | APR48_10415 | Not Available | Negative | 2220505 - 2221254 | 27444.9 |
| catalase | APR48_10420 | Not Available | Positive | 2221439 - 2223862 | 86950.8 |
| glycosyl transferase | APR48_10425 | Not Available | Positive | 2223934 - 2224623 | 23849.2 |
| dehydrogenase | APR48_10430 | Not Available | Positive | 2225227 - 2226099 | 30503.3 |
| dna polymerase | APR48_10435 | Not Available | Negative | 2227234 - 2230353 | 116033.0 |
| dna polymerase | APR48_10440 | Not Available | Negative | 2230363 - 2231730 | 50570.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
