Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_10295 | Not Available | Negative | 2201085 - 2201273 | 7413.78 |
| hypothetical protein | APR48_10300 | Not Available | Negative | 2201352 - 2202134 | 28769.2 |
| phosphoketolase | APR48_10305 | Not Available | Negative | 2202150 - 2204507 | 87416.2 |
| photosystem reaction center subunit h | APR48_10310 | Not Available | Negative | 2204553 - 2204915 | 12935.1 |
| hemerythrin | APR48_10315 | Not Available | Positive | 2205252 - 2205740 | 18136.6 |
| aldehyde oxidase | APR48_10320 | Not Available | Negative | 2206134 - 2208413 | 83201.0 |
| fad-binding molybdopterin dehydrogenase | APR48_10325 | Not Available | Negative | 2208410 - 2209450 | 36380.5 |
| hypothetical protein | APR48_10330 | Not Available | Negative | 2209447 - 2209971 | 18482.1 |
| aldehyde dehydrogenase | APR48_10335 | Not Available | Positive | 2210241 - 2210708 | 16749.5 |
| hypothetical protein | APR48_10340 | Not Available | Positive | 2210982 - 2211206 | 7973.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
