Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rieske (2fe-2s) protein | APR48_00275 | Not Available | Negative | 55401 - 56531 | 42892.6 |
| exodeoxyribonuclease vii | APR48_00280 | Not Available | Positive | 56813 - 57079 | 9375.17 |
| polyprenyl synthetase | APR48_00285 | Not Available | Positive | 57076 - 57996 | 31555.9 |
| 1-deoxy-d-xylulose-5-phosphate synthase | APR48_00290 | Not Available | Positive | 58019 - 59878 | 66476.9 |
| abc transporter substrate-binding protein | APR48_00295 | Not Available | Positive | 60015 - 61097 | 39565.3 |
| c4-dicarboxylate abc transporter | APR48_00300 | Not Available | Negative | 61215 - 63056 | 65072.3 |
| c4-dicarboxylate abc transporter substrate-binding protein | APR48_00305 | Not Available | Negative | 63075 - 63698 | 22963.3 |
| hypothetical protein | APR48_00310 | Not Available | Positive | 63862 - 65163 | 48132.6 |
| hypothetical protein | APR48_00315 | Not Available | Negative | 65176 - 67494 | 82624.0 |
| mfs transporter | APR48_00320 | Not Available | Negative | 67765 - 69204 | 51358.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
