Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | APR48_10195 | Not Available | Positive | 2179871 - 2180659 | 28343.1 |
| hydroxymethylglutaryl-coa lyase | APR48_10200 | Not Available | Positive | 2180676 - 2181653 | 35527.6 |
| hypothetical protein | APR48_10205 | Not Available | Positive | 2181766 - 2182932 | 39990.0 |
| methylcrotonoyl-coa carboxylase | APR48_10210 | Not Available | Positive | 2183067 - 2184644 | 56533.5 |
| enoyl-coa hydratase | APR48_10215 | Not Available | Positive | 2184655 - 2185452 | 28211.2 |
| 3-methylcrotonyl-coa carboxylase | APR48_10220 | Not Available | Positive | 2185463 - 2187484 | 71247.3 |
| acyl-coa dehydrogenase | APR48_10225 | Not Available | Positive | 2187481 - 2188626 | 42007.2 |
| thioesterase | APR48_10230 | Not Available | Positive | 2188665 - 2189156 | 17750.6 |
| thioesterase | APR48_10235 | Not Available | Positive | 2189153 - 2189611 | 16678.2 |
| 2,4-dienoyl-coa reductase | APR48_10240 | Not Available | Positive | 2189608 - 2190495 | 31192.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
