Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_10145 | Not Available | Negative | 2169479 - 2170636 | 42145.6 |
| hypothetical protein | APR48_10150 | Not Available | Negative | 2170661 - 2171125 | 16096.4 |
| carnitine dehydratase | APR48_10155 | Not Available | Positive | 2171359 - 2172534 | 41331.9 |
| acetyl-coa acetyltransferase | APR48_10160 | Not Available | Negative | 2172623 - 2173861 | 45147.4 |
| short-chain dehydrogenase | APR48_10165 | Not Available | Negative | 2173858 - 2174739 | 31423.6 |
| short-chain dehydrogenase | APR48_10170 | Not Available | Negative | 2174736 - 2175641 | 32295.5 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | APR48_10175 | Not Available | Negative | 2175628 - 2177301 | 60396.3 |
| acyl dehydratase | APR48_10180 | Not Available | Negative | 2177341 - 2177847 | 18825.3 |
| tetr family transcriptional regulator | APR48_10185 | Not Available | Negative | 2177854 - 2178477 | 23165.5 |
| cyclohexanecarboxyl-coa dehydrogenase | APR48_10190 | Not Available | Positive | 2178708 - 2179874 | 42374.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
