Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_09980 | Not Available | Negative | 2135281 - 2135661 | 13696.6 |
| thiolase | APR48_09990 | Not Available | Positive | 2137345 - 2138550 | 41456.5 |
| hypothetical protein | APR48_09995 | Not Available | Positive | 2138556 - 2139002 | 16065.2 |
| hypothetical protein | APR48_10000 | Not Available | Negative | 2139151 - 2139753 | 21831.5 |
| iclr family transcriptional regulator | APR48_10010 | Not Available | Positive | 2141304 - 2142098 | 28070.8 |
| abc transporter substrate-binding protein | APR48_10020 | Not Available | Positive | 2142965 - 2143891 | 31150.2 |
| pyruvate dehydrogenase | APR48_10025 | Not Available | Positive | 2143888 - 2144901 | 34963.3 |
| enoyl-coa hydratase | APR48_10030 | Not Available | Positive | 2144910 - 2145689 | 27991.2 |
| hypothetical protein | APR48_10035 | Not Available | Positive | 2145694 - 2146923 | 42100.0 |
| acyl-coa dehydrogenase | APR48_10040 | Not Available | Positive | 2146951 - 2148123 | 42278.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
