Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_09930 | Not Available | Positive | 2126115 - 2126753 | 23651.5 |
| aminocarboxymuconate-semialdehyde decarboxylase | APR48_09935 | Not Available | Positive | 2126743 - 2127765 | 37227.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | APR48_09940 | Not Available | Positive | 2127822 - 2128844 | 35482.8 |
| hypothetical protein | APR48_09945 | Not Available | Positive | 2128859 - 2129227 | 12898.1 |
| anthranilate 1,2-dioxygenase | APR48_09950 | Not Available | Positive | 2129243 - 2129731 | 18612.3 |
| rieske (2fe-2s) protein | APR48_09955 | Not Available | Positive | 2129751 - 2131022 | 47253.1 |
| benzoate 1,2-dioxygenase large subunit | APR48_09960 | Not Available | Positive | 2131057 - 2132391 | 49848.9 |
| hypothetical protein | APR48_09965 | Not Available | Positive | 2132388 - 2132888 | 18972.3 |
| 4-hydroxybenzoate transporter | APR48_09970 | Not Available | Positive | 2133080 - 2134414 | 46854.6 |
| 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase | APR48_09975 | Not Available | Positive | 2134456 - 2135265 | 28627.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
