Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_09880 | Not Available | Positive | 2116763 - 2117962 | 43033.0 |
| hypothetical protein | APR48_09885 | Not Available | Positive | 2118015 - 2118875 | 29698.9 |
| hypothetical protein | APR48_09890 | Not Available | Positive | 2118872 - 2119870 | 35024.2 |
| hypothetical protein | APR48_09895 | Not Available | Positive | 2119867 - 2120628 | 27822.3 |
| abc transporter atp-binding protein | APR48_09900 | Not Available | Positive | 2120621 - 2121319 | 24897.4 |
| p-cumate dioxygenase | APR48_09905 | Not Available | Positive | 2121372 - 2122643 | 47448.1 |
| aromatic-ring-hydroxylating dioxygenase | APR48_09910 | Not Available | Positive | 2122658 - 2123146 | 18756.1 |
| hypothetical protein | APR48_09915 | Not Available | Positive | 2123158 - 2124066 | 33370.3 |
| 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase | APR48_09920 | Not Available | Positive | 2124063 - 2124866 | 27686.4 |
| hypothetical protein | APR48_09925 | Not Available | Positive | 2124863 - 2126089 | 41225.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
