Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | APR48_09830 | Not Available | Positive | 2108789 - 2109583 | 27810.1 |
| acetaldehyde dehydrogenase (acetylating) | APR48_09835 | Not Available | Positive | 2109603 - 2110547 | 32977.2 |
| 4-hydroxy-2-oxovalerate aldolase | APR48_09840 | Not Available | Positive | 2110588 - 2111631 | 37141.4 |
| 4-oxalocrotonate decarboxylase | APR48_09845 | Not Available | Positive | 2111644 - 2112432 | 27203.1 |
| 4-oxalocrotonate tautomerase | APR48_09850 | Not Available | Positive | 2112468 - 2112659 | 7073.5 |
| (2fe-2s)-binding protein | APR48_09855 | Not Available | Positive | 2112753 - 2113940 | 44592.2 |
| hypothetical protein | APR48_09860 | Not Available | Positive | 2113943 - 2114425 | 17924.4 |
| hypothetical protein | APR48_09865 | Not Available | Positive | 2114613 - 2115869 | 44249.8 |
| hypothetical protein | APR48_09870 | Not Available | Negative | 2115890 - 2116126 | 8812.68 |
| hypothetical protein | APR48_09875 | Not Available | Positive | 2116115 - 2116666 | 19385.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
