Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_09780 | Not Available | Negative | 2100106 - 2100339 | 8578.7 |
| hypothetical protein | APR48_09785 | Not Available | Negative | 2100752 - 2101939 | 42039.7 |
| transcriptional regulator | APR48_09790 | Not Available | Negative | 2102007 - 2102705 | 26500.8 |
| 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase | APR48_09795 | Not Available | Positive | 2102836 - 2103687 | 31280.6 |
| ferredoxin | APR48_09800 | Not Available | Positive | 2103698 - 2104081 | 13268.1 |
| catechol 2,3-dioxygenase | APR48_09805 | Not Available | Positive | 2104083 - 2105027 | 34930.7 |
| cobalamin adenosyltransferase | APR48_09810 | Not Available | Positive | 2105042 - 2105476 | 14398.1 |
| 2-hydroxymuconic semialdehyde dehydrogenase | APR48_09815 | Not Available | Positive | 2105484 - 2106938 | 51888.1 |
| 2-oxopent-4-enoate hydratase | APR48_09820 | Not Available | Positive | 2106944 - 2107726 | 27434.6 |
| twin-arginine translocation pathway signal | APR48_09825 | Not Available | Positive | 2107774 - 2108772 | 34575.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
