Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine synthase | APR48_09730 | Not Available | Positive | 2088549 - 2089667 | 38855.5 |
| abc transporter substrate-binding protein | APR48_09735 | Not Available | Positive | 2089711 - 2090688 | 33800.0 |
| dna-binding protein | APR48_09740 | Not Available | Negative | 2090692 - 2091318 | 22921.2 |
| abc transporter substrate-binding protein | APR48_09745 | Not Available | Positive | 2091484 - 2092392 | 32223.8 |
| pyridoxal-5'-phosphate-dependent protein subunit beta | APR48_09750 | Not Available | Positive | 2092425 - 2093567 | 40923.1 |
| alanine racemase | APR48_09755 | Not Available | Negative | 2093603 - 2094735 | 39856.9 |
| hypothetical protein | APR48_09760 | Not Available | Negative | 2094819 - 2095301 | 17371.1 |
| integrase | APR48_09765 | Not Available | Negative | 2096436 - 2097434 | 37397.6 |
| integrase | APR48_09770 | Not Available | Negative | 2097431 - 2098363 | 35198.9 |
| hypothetical protein | APR48_09775 | Not Available | Negative | 2098360 - 2099598 | 45558.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
