Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_00225 | Not Available | Negative | 44970 - 45728 | 27281.6 |
| hypothetical protein | APR48_00230 | Not Available | Negative | 45802 - 46143 | 12570.6 |
| peptidase m20 | APR48_00235 | Not Available | Positive | 46370 - 47644 | 44504.8 |
| small-conductance mechanosensitive channel | APR48_00240 | Not Available | Negative | 47750 - 49927 | 80905.7 |
| hypothetical protein | APR48_00245 | Not Available | Negative | 50138 - 50779 | 22683.3 |
| peptide abc transporter permease | APR48_00250 | Not Available | Negative | 50784 - 52046 | 44917.3 |
| methionine abc transporter atp-binding protein | APR48_00255 | Not Available | Negative | 52043 - 52789 | 27321.7 |
| metal abc transporter substrate-binding protein | APR48_00260 | Not Available | Negative | 52794 - 53390 | 20891.0 |
| 3-mercaptopyruvate sulfurtransferase | APR48_00265 | Not Available | Negative | 53387 - 54298 | 32332.2 |
| hypothetical protein | APR48_00270 | Not Available | Negative | 54369 - 55292 | 32793.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
