Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein | APR48_09680 | Not Available | Negative | 2078314 - 2078997 | 23921.3 |
| urease subunit beta | APR48_09685 | Not Available | Negative | 2079010 - 2079315 | 11034.1 |
| urease accessory protein urej | APR48_09690 | Not Available | Negative | 2079332 - 2079937 | 20008.1 |
| urease subunit gamma | APR48_09695 | Not Available | Negative | 2079975 - 2080277 | 10891.4 |
| atpase | APR48_09700 | Not Available | Positive | 2080404 - 2084012 | 130398.0 |
| luxr family transcriptional regulator | APR48_09705 | Not Available | Positive | 2084041 - 2085045 | 36525.1 |
| hypothetical protein | APR48_09710 | Not Available | Positive | 2085237 - 2085833 | 21215.2 |
| hypothetical protein | APR48_09715 | Not Available | Negative | 2085820 - 2086452 | 22655.1 |
| hypothetical protein | APR48_09720 | Not Available | Positive | 2086596 - 2087462 | 32419.3 |
| lysr family transcriptional regulator | APR48_09725 | Not Available | Negative | 2087467 - 2088387 | 34051.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
