Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | APR48_09630 | Not Available | Positive | 2069562 - 2070122 | 20125.9 |
| glucose 1-dehydrogenase | APR48_09635 | Not Available | Positive | 2070241 - 2070981 | 26705.8 |
| nitronate monooxygenase | APR48_09640 | Not Available | Positive | 2071028 - 2072008 | 34709.3 |
| alpha-ketoglutarate-dependent dioxygenase | APR48_09645 | Not Available | Positive | 2072092 - 2072745 | 23290.1 |
| hydratase | APR48_09650 | Not Available | Negative | 2072755 - 2073552 | 28802.2 |
| hypothetical protein | APR48_09655 | Not Available | Positive | 2073677 - 2074198 | 18128.6 |
| urease accessory protein ureg | APR48_09660 | Not Available | Negative | 2074217 - 2074867 | 23571.6 |
| urease accessory protein uref | APR48_09665 | Not Available | Negative | 2074891 - 2075571 | 24530.9 |
| urease accessory protein uree | APR48_09670 | Not Available | Negative | 2075904 - 2076506 | 21687.7 |
| urease subunit alpha | APR48_09675 | Not Available | Negative | 2076608 - 2078326 | 60704.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
