Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine kinase | APR48_09580 | Not Available | Negative | 2058471 - 2059751 | 45300.8 |
| glutamate-1-semialdehyde 2,1-aminomutase | APR48_09585 | Not Available | Positive | 2059863 - 2061116 | 44690.0 |
| hypothetical protein | APR48_09590 | Not Available | Positive | 2061156 - 2062298 | 40374.1 |
| abc transporter permease | APR48_09595 | Not Available | Positive | 2062295 - 2063200 | 32500.2 |
| abc transporter permease | APR48_09600 | Not Available | Positive | 2063197 - 2064027 | 30284.7 |
| abc transporter substrate-binding protein | APR48_09605 | Not Available | Positive | 2064113 - 2065141 | 37585.3 |
| asnc family transcriptional regulator | APR48_09610 | Not Available | Positive | 2065239 - 2065988 | 28663.7 |
| hypothetical protein | APR48_09615 | Not Available | Positive | 2065985 - 2066323 | 13131.8 |
| n,n-dimethylformamidase | APR48_09620 | Not Available | Positive | 2066346 - 2068595 | 81193.0 |
| shikimate dehydrogenase | APR48_09625 | Not Available | Positive | 2068613 - 2069416 | 27367.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
