Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_09530 | Not Available | Negative | 2047666 - 2048862 | 40340.5 |
| methyltransferase | APR48_09535 | Not Available | Negative | 2048996 - 2049661 | 23580.2 |
| tetr family transcriptional regulator | APR48_09540 | Not Available | Positive | 2049745 - 2050377 | 23111.6 |
| alpha-ketoglutarate permease | APR48_09545 | Not Available | Negative | 2050450 - 2051787 | 47950.4 |
| luxr family transcriptional regulator | APR48_09550 | Not Available | Negative | 2051957 - 2052571 | 22265.8 |
| histidine kinase | APR48_09555 | Not Available | Negative | 2052568 - 2054736 | 79475.5 |
| hypothetical protein | APR48_09560 | Not Available | Negative | 2054816 - 2055496 | 25368.4 |
| hypothetical protein | APR48_09565 | Not Available | Positive | 2055686 - 2056189 | 17743.4 |
| hypothetical protein | APR48_09570 | Not Available | Positive | 2056186 - 2057733 | 57886.3 |
| fuculose phosphate aldolase | APR48_09575 | Not Available | Negative | 2057735 - 2058388 | 23136.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
