Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | APR48_09470 | Not Available | Positive | 2033918 - 2034631 | 25590.7 |
| hypothetical protein | APR48_09475 | Not Available | Positive | 2034654 - 2035646 | 34134.1 |
| hypothetical protein | APR48_09490 | Not Available | Negative | 2038915 - 2039907 | 34134.1 |
| amidohydrolase | APR48_09495 | Not Available | Negative | 2039930 - 2040643 | 25590.7 |
| lysr family transcriptional regulator | APR48_09500 | Not Available | Positive | 2040899 - 2041846 | 35001.7 |
| carnitine dehydratase | APR48_09505 | Not Available | Positive | 2041979 - 2043457 | 53064.3 |
| fumarate reductase | APR48_09510 | Not Available | Positive | 2043499 - 2044980 | 52067.0 |
| hypothetical protein | APR48_09515 | Not Available | Positive | 2045067 - 2046038 | 33963.1 |
| lysr family transcriptional regulator | APR48_09520 | Not Available | Positive | 2046099 - 2047031 | 34770.2 |
| dna-binding protein | APR48_09525 | Not Available | Negative | 2047110 - 2047535 | 14361.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
