Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoglutarate permease | APR48_09420 | Not Available | Positive | 2022774 - 2024111 | 47950.4 |
| tetr family transcriptional regulator | APR48_09425 | Not Available | Negative | 2024184 - 2024816 | 23111.6 |
| methyltransferase | APR48_09430 | Not Available | Positive | 2024900 - 2025565 | 23580.2 |
| hypothetical protein | APR48_09435 | Not Available | Positive | 2025699 - 2026895 | 40340.5 |
| dna-binding protein | APR48_09440 | Not Available | Positive | 2027026 - 2027451 | 14361.8 |
| lysr family transcriptional regulator | APR48_09445 | Not Available | Negative | 2027530 - 2028462 | 34770.2 |
| hypothetical protein | APR48_09450 | Not Available | Negative | 2028523 - 2029494 | 33963.1 |
| fumarate reductase | APR48_09455 | Not Available | Negative | 2029581 - 2031062 | 52067.0 |
| carnitine dehydratase | APR48_09460 | Not Available | Negative | 2031104 - 2032582 | 53064.3 |
| lysr family transcriptional regulator | APR48_09465 | Not Available | Negative | 2032715 - 2033662 | 35001.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
