Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR48_09370 | Not Available | Negative | 2011361 - 2012266 | 32500.2 |
| hypothetical protein | APR48_09375 | Not Available | Negative | 2012263 - 2013405 | 40374.1 |
| glutamate-1-semialdehyde 2,1-aminomutase | APR48_09380 | Not Available | Negative | 2013445 - 2014698 | 44690.0 |
| serine kinase | APR48_09385 | Not Available | Positive | 2014810 - 2016090 | 45300.8 |
| fuculose phosphate aldolase | APR48_09390 | Not Available | Positive | 2016173 - 2016826 | 23136.4 |
| hypothetical protein | APR48_09395 | Not Available | Negative | 2016828 - 2018375 | 57886.3 |
| hypothetical protein | APR48_09400 | Not Available | Negative | 2018372 - 2018875 | 17743.4 |
| hypothetical protein | APR48_09405 | Not Available | Positive | 2019071 - 2019745 | 25158.1 |
| histidine kinase | APR48_09410 | Not Available | Positive | 2019825 - 2021993 | 79475.5 |
| luxr family transcriptional regulator | APR48_09415 | Not Available | Positive | 2021990 - 2022604 | 22265.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
