Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_09270 | Not Available | Positive | 1990730 - 1991176 | 15281.9 |
| hypothetical protein | APR48_09275 | Not Available | Positive | 1991451 - 1991897 | 15171.3 |
| transporter | APR48_09280 | Not Available | Positive | 1992033 - 1993388 | 49645.2 |
| secretion protein hlyd | APR48_09285 | Not Available | Positive | 1993385 - 1995109 | 59891.7 |
| cation transporter | APR48_09290 | Not Available | Positive | 1995106 - 1998285 | 116365.0 |
| hypothetical protein | APR48_09295 | Not Available | Positive | 1998272 - 1998676 | 14309.4 |
| urease accessory protein uref | APR48_09300 | Not Available | Positive | 1998990 - 1999670 | 24530.9 |
| urease accessory protein ureg | APR48_09305 | Not Available | Positive | 1999694 - 2000344 | 23571.6 |
| hypothetical protein | APR48_09310 | Not Available | Negative | 2000363 - 2000884 | 18128.6 |
| hydratase | APR48_09315 | Not Available | Positive | 2001009 - 2001806 | 28802.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
