Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper oxidase | APR48_09220 | Not Available | Negative | 1977191 - 1978606 | 52047.8 |
| transporter | APR48_09225 | Not Available | Negative | 1978643 - 1980067 | 51294.8 |
| hypothetical protein | APR48_09230 | Not Available | Negative | 1980555 - 1980989 | 15117.1 |
| two-component system response regulator | APR48_09235 | Not Available | Positive | 1981634 - 1982317 | 25396.9 |
| histidine kinase | APR48_09240 | Not Available | Positive | 1982371 - 1983735 | 49493.1 |
| type ii restriction endonuclease | APR48_09245 | Not Available | Positive | 1983922 - 1985184 | 46193.2 |
| hypothetical protein | APR48_09250 | Not Available | Negative | 1985730 - 1986068 | 11595.7 |
| hypothetical protein | APR48_09255 | Not Available | Negative | 1986273 - 1986596 | 11937.3 |
| copper resistance protein copb | APR48_09260 | Not Available | Negative | 1986825 - 1987586 | 28259.4 |
| copper resistance protein copa | APR48_09265 | Not Available | Negative | 1987940 - 1989709 | 65881.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
