Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter | APR48_00175 | Not Available | Negative | 33379 - 34314 | 33645.3 |
| peptide abc transporter permease | APR48_00180 | Not Available | Negative | 34348 - 35934 | 57286.7 |
| microcystin lr degradation protein mlrc-like protein | APR48_00185 | Not Available | Negative | 35999 - 37450 | 51529.5 |
| fad-dependent oxidoreductase | APR48_00190 | Not Available | Negative | 37509 - 38675 | 41256.3 |
| xre family transcriptional regulator | APR48_00195 | Not Available | Positive | 38923 - 39633 | 25466.6 |
| hypothetical protein | APR48_00200 | Not Available | Positive | 39653 - 39964 | 11490.6 |
| cytochrome c | APR48_00205 | Not Available | Positive | 40121 - 41428 | 45331.9 |
| (2fe-2s)-binding protein | APR48_00210 | Not Available | Positive | 41425 - 41910 | 17177.1 |
| aldehyde dehydrogenase | APR48_00215 | Not Available | Positive | 41907 - 44201 | 82661.5 |
| hypothetical protein | APR48_00220 | Not Available | Negative | 44371 - 44853 | 17255.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
