Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_09170 | Not Available | Negative | 1967274 - 1967702 | 15424.6 |
| lysr family transcriptional regulator | APR48_09175 | Not Available | Positive | 1967823 - 1968761 | 34337.3 |
| copper-transporting atpase | APR48_09180 | Not Available | Negative | 1968848 - 1971187 | 82207.1 |
| copper-binding protein | APR48_09185 | Not Available | Negative | 1971397 - 1971588 | 6673.91 |
| copper oxidase | APR48_09190 | Not Available | Negative | 1971689 - 1973704 | 73552.4 |
| cytochrome c | APR48_09195 | Not Available | Negative | 1974148 - 1974804 | 23000.7 |
| hypothetical protein | APR48_09200 | Not Available | Negative | 1974867 - 1975238 | 13257.7 |
| hypothetical protein | APR48_09205 | Not Available | Negative | 1975342 - 1976154 | 30685.4 |
| hypothetical protein | APR48_09210 | Not Available | Negative | 1976203 - 1976484 | 9890.04 |
| hypothetical protein | APR48_09215 | Not Available | Negative | 1976653 - 1977144 | 17302.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
