Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c assembly protein | APR48_08960 | Not Available | Negative | 1920281 - 1921603 | 49270.4 |
| cation transporter | APR48_08965 | Not Available | Negative | 1921600 - 1922226 | 21865.9 |
| disulfide bond formation protein dsba | APR48_08970 | Not Available | Negative | 1922253 - 1922888 | 23389.2 |
| dihydrolipoamide dehydrogenase | APR48_08975 | Not Available | Positive | 1923113 - 1924558 | 50790.4 |
| hypothetical protein | APR48_08980 | Not Available | Positive | 1924883 - 1925113 | 7953.32 |
| hypothetical protein | APR48_08985 | Not Available | Positive | 1925298 - 1925747 | 16137.2 |
| redoxin | APR48_08990 | Not Available | Positive | 1926089 - 1926589 | 18006.8 |
| protein-disulfide reductase | APR48_09005 | Not Available | Negative | 1931752 - 1933794 | 72394.7 |
| signal peptidase ii | APR48_09010 | Not Available | Negative | 1935001 - 1935477 | 17645.3 |
| pa-phosphatase | APR48_09015 | Not Available | Negative | 1935554 - 1936168 | 21979.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
