Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_08800 | Not Available | Negative | 1889796 - 1890839 | 37096.1 |
| cyclophilin-like superfamily protein | APR48_08805 | Not Available | Negative | 1890866 - 1891273 | 14962.9 |
| abc transporter permease | APR48_08810 | Not Available | Negative | 1891300 - 1892082 | 27583.8 |
| nitrate abc transporter atp-binding protein | APR48_08815 | Not Available | Negative | 1892079 - 1892963 | 32117.3 |
| cyanuric acid amidohydrolase | APR48_08820 | Not Available | Negative | 1892972 - 1894126 | 39718.1 |
| allantoinase | APR48_08825 | Not Available | Negative | 1894123 - 1895592 | 53087.7 |
| short-chain dehydrogenase | APR48_08830 | Not Available | Negative | 1895610 - 1896401 | 27502.3 |
| abc transporter substrate-binding protein | APR48_08835 | Not Available | Negative | 1896440 - 1897480 | 37474.2 |
| isochorismatase | APR48_08840 | Not Available | Negative | 1897482 - 1898327 | 30816.9 |
| lysr family transcriptional regulator | APR48_08845 | Not Available | Positive | 1898483 - 1899388 | 33851.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
