Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mred | APR48_08750 | Not Available | Negative | 1879174 - 1879695 | 19081.1 |
| rod shape-determining protein mrec | APR48_08755 | Not Available | Negative | 1879692 - 1880699 | 35204.5 |
| rod shape-determining protein mreb | APR48_08760 | Not Available | Negative | 1880784 - 1881827 | 36836.0 |
| glutamyl-trna amidotransferase | APR48_08765 | Not Available | Positive | 1882052 - 1882351 | 10842.0 |
| glutamyl-trna amidotransferase | APR48_08770 | Not Available | Positive | 1882348 - 1883862 | 53027.9 |
| glutamyl-trna amidotransferase | APR48_08775 | Not Available | Positive | 1883864 - 1885354 | 54033.2 |
| hypothetical protein | APR48_08780 | Not Available | Negative | 1885435 - 1886145 | 26327.1 |
| orotate phosphoribosyltransferase | APR48_08785 | Not Available | Negative | 1886158 - 1886841 | 24121.8 |
| exodeoxyribonuclease iii | APR48_08790 | Not Available | Positive | 1886853 - 1887656 | 30220.0 |
| hydrolase | APR48_08795 | Not Available | Negative | 1888285 - 1889445 | 41459.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
