Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase | APR48_08700 | Not Available | Positive | 1866817 - 1867332 | 18625.4 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | APR48_08705 | Not Available | Positive | 1867415 - 1868287 | 31665.7 |
| hypothetical protein | APR48_08710 | Not Available | Positive | 1868331 - 1869326 | 34238.7 |
| glucose dehydrogenase | APR48_08715 | Not Available | Negative | 1869323 - 1871722 | 84834.7 |
| rok family transcriptional regulator | APR48_08720 | Not Available | Negative | 1871898 - 1873052 | 40160.6 |
| abc transporter atp-binding protein | APR48_08725 | Not Available | Negative | 1873076 - 1873876 | 28924.1 |
| abc transporter permease | APR48_08730 | Not Available | Negative | 1873879 - 1875069 | 41907.7 |
| sugar abc transporter substrate-binding protein | APR48_08735 | Not Available | Negative | 1875164 - 1876186 | 35839.2 |
| penicillin-binding protein | APR48_08740 | Not Available | Negative | 1876416 - 1878386 | 71606.5 |
| hypothetical protein | APR48_08745 | Not Available | Negative | 1878413 - 1879171 | 26831.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
