Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_00130 | Not Available | Positive | 25251 - 25442 | 6787.24 |
| lysr family transcriptional regulator | APR48_00135 | Not Available | Negative | 25468 - 26400 | 34141.8 |
| 3-oxoacyl-acp reductase | APR48_00140 | Not Available | Positive | 26529 - 27290 | 26318.7 |
| hypothetical protein | APR48_00145 | Not Available | Positive | 27342 - 28316 | 34464.9 |
| carboxymuconolactone decarboxylase | APR48_00150 | Not Available | Positive | 28354 - 28878 | 19362.2 |
| d-aminoacylase | APR48_00155 | Not Available | Negative | 28894 - 30345 | 52000.1 |
| peptide abc transporter substrate-binding protein | APR48_00160 | Not Available | Negative | 30380 - 31378 | 36452.1 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 32074 - 32402 | Not Available |
| peptide abc transporter atp-binding protein | APR48_00165 | Not Available | Negative | 31375 - 32433 | 38218.6 |
| peptide abc transporter permease | APR48_00170 | Not Available | Negative | 32447 - 33352 | 32039.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
