Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_08650 | Not Available | Positive | 1853877 - 1854848 | 34149.5 |
| hypothetical protein | APR48_08655 | Not Available | Positive | 1854851 - 1855219 | 13109.0 |
| hypothetical protein | APR48_08660 | Not Available | Positive | 1855362 - 1856684 | 48179.6 |
| alpha/beta hydrolase | APR48_08665 | Not Available | Negative | 1856691 - 1857494 | 29309.3 |
| hypothetical protein | APR48_08670 | Not Available | Negative | 1857628 - 1859811 | 77094.8 |
| luxr family transcriptional regulator | APR48_08675 | Not Available | Positive | 1860042 - 1861022 | 36155.2 |
| alcohol dehydrogenase | APR48_08680 | Not Available | Negative | 1861050 - 1863179 | 76822.7 |
| fis family transcriptional regulator | APR48_08685 | Not Available | Positive | 1863313 - 1864575 | 45236.9 |
| transcriptional regulator | APR48_08690 | Not Available | Negative | 1864577 - 1865425 | 29911.5 |
| 3-isopropylmalate dehydratase | APR48_08695 | Not Available | Positive | 1865537 - 1866820 | 45715.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
