Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_08550 | Not Available | Negative | 1835455 - 1835964 | 18265.0 |
| hypothetical protein | APR48_08555 | Not Available | Negative | 1836132 - 1836467 | 12046.1 |
| two-component system sensor histidine kinase/response regulator | APR48_08560 | Not Available | Negative | 1836505 - 1838463 | 71237.8 |
| pyridine nucleotide-disulfide oxidoreductase | APR48_08565 | Not Available | Positive | 1838863 - 1840074 | 42545.9 |
| iclr family transcriptional regulator | APR48_08570 | Not Available | Negative | 1840087 - 1840929 | 29739.9 |
| 2-deoxy-d-gluconate 3-dehydrogenase | APR48_08575 | Not Available | Negative | 1841025 - 1841744 | 24333.6 |
| abc transporter substrate-binding protein | APR48_08580 | Not Available | Negative | 1841770 - 1842732 | 33986.0 |
| 3-oxoacyl-acp reductase | APR48_08585 | Not Available | Negative | 1842803 - 1843543 | 25139.9 |
| cupin | APR48_08590 | Not Available | Negative | 1843540 - 1844067 | 20493.3 |
| lysr family transcriptional regulator | APR48_08595 | Not Available | Negative | 1844207 - 1845121 | 33383.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
