Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR48_08500 | Not Available | Positive | 1826586 - 1827389 | 28703.1 |
| sulfonate abc transporter atp-binding protein | APR48_08505 | Not Available | Positive | 1827386 - 1828120 | 26158.6 |
| sulfonate abc transporter substrate-binding protein | APR48_08510 | Not Available | Positive | 1828163 - 1829170 | 36350.1 |
| peptidase | APR48_08515 | Not Available | Negative | 1829210 - 1830556 | 46661.4 |
| hypothetical protein | APR48_08520 | Not Available | Positive | 1830855 - 1831742 | 31689.4 |
| tetr family transcriptional regulator | APR48_08525 | Not Available | Negative | 1831761 - 1832369 | 21775.4 |
| nad(p)h dehydrogenase | APR48_08530 | Not Available | Positive | 1832448 - 1833071 | 22047.9 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | APR48_08535 | Not Available | Negative | 1833080 - 1834204 | 40289.4 |
| hypothetical protein | APR48_08540 | Not Available | Negative | 1834262 - 1834498 | 8715.26 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | APR48_08545 | Not Available | Negative | 1834539 - 1835384 | 30250.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
