Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monooxygenase | APR48_08445 | Not Available | Positive | 1812798 - 1814039 | 44697.3 |
| monooxygenase | APR48_08450 | Not Available | Negative | 1814067 - 1815290 | 43916.9 |
| methionine abc transporter atp-binding protein | APR48_08460 | Not Available | Negative | 1816086 - 1817192 | 38756.1 |
| metal abc transporter substrate-binding protein | APR48_08465 | Not Available | Negative | 1817189 - 1818007 | 29805.7 |
| abc transporter substrate-binding protein | APR48_08470 | Not Available | Positive | 1818240 - 1819265 | 36384.0 |
| hypothetical protein | APR48_08475 | Not Available | Negative | 1819275 - 1820963 | 60213.1 |
| peptide abc transporter permease | APR48_08480 | Not Available | Negative | 1820960 - 1821835 | 30653.9 |
| abc transporter permease | APR48_08485 | Not Available | Negative | 1821832 - 1822749 | 32566.6 |
| abc transporter substrate-binding protein | APR48_08490 | Not Available | Negative | 1822757 - 1824361 | 58276.9 |
| hypothetical protein | APR48_08495 | Not Available | Negative | 1824619 - 1826301 | 60970.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
