Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | APR48_08340 | Not Available | Positive | 1791307 - 1792296 | 36548.1 |
| crossover junction endodeoxyribonuclease ruvc | APR48_08345 | Not Available | Positive | 1792304 - 1792852 | 19219.2 |
| hypothetical protein | APR48_08350 | Not Available | Negative | 1792866 - 1793915 | 38769.2 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | APR48_08355 | Not Available | Negative | 1794358 - 1795281 | 33839.4 |
| cell division protein ftsz | APR48_08360 | Not Available | Negative | 1795532 - 1796737 | 41717.8 |
| cell division protein ftsa | APR48_08365 | Not Available | Negative | 1796907 - 1798136 | 43588.2 |
| cell division protein ftsq | APR48_08370 | Not Available | Negative | 1798158 - 1798949 | 28965.8 |
| d-alanine--d-alanine ligase | APR48_08375 | Not Available | Negative | 1798952 - 1799923 | 34859.8 |
| udp-n-acetylmuramate--alanine ligase | APR48_08380 | Not Available | Negative | 1799920 - 1801389 | 50878.1 |
| udp-diphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | APR48_08385 | Not Available | Negative | 1801386 - 1802450 | 37699.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
